BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C12SP1|AL429721
(924 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1758 1792 0.0
>3x_Contig1758
Length = 25930
Score = 1792 bits (901), Expect = 0.0
Identities = 918/925 (99%), Gaps = 1/925 (0%)
Strand = Plus / Minus
Query: 1 cactgaaaaga-caacaatttacccagtgaaaaagctgacccaagaaacagcgatggtat 59
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7613 cactgaaaagagcaacaatttacccagtgaaaaagctgacccaagaaacagcgatggtac 7554
Query: 60 tattgdcacggacacaaggagcattgcstccactgcgaaccctgaaaaatcgagatacgt 119
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 7553 tattgacacggacacaaggagcattgcatccactgcgaaccctgaaaaatcgagatacgt 7494
Query: 120 taacgaacaagctttcttatccttatcgtggtggttattaaaccgtggatacctacaata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7493 taacgaacaagctttcttatccttatcgtggtggttattaaaccgtggatacctacaata 7434
Query: 180 caagagtatcattgaacaattggtgaaagaagagttccaaaattcgaacccaagagatat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7433 caagagtatcattgaacaattggtgaaagaagagttccaaaattcgaacccaagagatat 7374
Query: 240 catgacaatggatgagttcagtggcaagataagcaagatattcgtcaccacaaacaagca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7373 catgacaatggatgagttcagtggcaagataagcaagatattcgtcaccacaaacaagca 7314
Query: 300 attctttcaacagccacaatcgaatgawatgttcatttcatgtctacttcctgaacctaa 359
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 7313 attctttcaacagccacaatcgaatgaaatgttcatttcatgtctacttcctgaacctaa 7254
Query: 360 cttagagagatttgttcttcaacaaactttagaacaagatgctttgaaagtactatacga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7253 cttagagagatttgttcttcaacaaactttagaacaagatgctttgaaagtactatacga 7194
Query: 420 ggataatctattactaawacaacttgtacaagagaccaacaaatgcctacaatcacctgg 479
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7193 ggataatctattactaaaacaacttgtacaagagaccaacaaatgcctacaatcacctgg 7134
Query: 480 aacatggattgtcctggagtctttaatcgatgaaacattccacacaatcatggaacaaat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7133 aacatggattgtcctggagtctttaatcgatgaaacattccacacaatcatggaacaaat 7074
Query: 540 cgaggataatgtcaacagcaaatcgaaacctaaatcgaatgatgacgacaccaaagtagt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7073 cgaggataatgtcaacagcaaatcgaaacctaaatcgaatgatgacgacaccaaagtagt 7014
Query: 600 cgatatatccaaaaattcatatcaaatcgcattattctctatcgccacgaaagactgcac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7013 cgatatatccaaaaattcatatcaaatcgcattattctctatcgccacgaaagactgcac 6954
Query: 660 aaacgaaatgttgaaagcgggactcgtatcaatgaacaacaagttcctacagaaactaca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6953 aaacgaaatgttgaaagcgggactcgtatcaatgaacaacaagttcctacagaaactaca 6894
Query: 720 ctccatctcggcacttgacgatctcagtgcatgcgtatatagtaacttcggtctatgaaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6893 ctccatctcggcacttgacgatctcagtgcatgcgtatatagtaacttcggtctatgaaa 6834
Query: 780 accttacttggccctccattcaagtactgaaatcgctccataccgtgtatgtagatagtt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6833 accttacttggccctccattcaagtactgaaatcgctccataccgtgtatgtagatagtt 6774
Query: 840 ctatagttaacgttactctttcactggcactacggggtttctcttcctgtttctttaatg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6773 ctatagttaacgttactctttcactggcactacggggtttctcttcctgtttctttaatg 6714
Query: 900 gccacgtgatcataattttyttttc 924
||||||||||||||||||| |||||
Sbjct: 6713 gccacgtgatcataattttcttttc 6689
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6723
Number of Sequences: 1807
Number of extensions: 6723
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)